Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSTPPASAGRSTPPALAGHSTPPALAGHSTLCGRPVAGDRALIMAIVNRTPDSFYDKGATFS-DAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGG-VDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGVDLTERLEGTLAATALAAAAGARMFRVHEVAATRRVLEMVASIQGVRPPTRTVRGLA |
| 4NHV Chain:B ((37-293)) | --------------------------------------NEKTLIMGILNVTP---SDGGSYNEVDAAVRHA-KEMRDEGAHIIDIGGES------VSVEEEIKRVVPMIQAVSKEVK-LPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNM------------NYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIG------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NHV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159115 for 2114 contacts (-75.3/contact) +
2D Compatibility (PS) -27533 + (NN) -16876 + (LL) 1784
1D Compatibility (HY) -20400 + (ID) 4450
Total energy: -226590.0 ( -107.19 by residue)
QMean score : 0.501
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