Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MGNLDLLLR---------------LSGRIVKGCRPL-GSVALARCGPAVRW--PRWPRPAILEHMFDLVSLAGVDSRDDEASLTARIAELERVKSAAAAGQARAAAALDKLRRCNEADAGVPARRRGRGVASEVALARRDSPARGGRHLGFAKALVYEMPHTLAALEVGRLSEWRATLIVRESACLDVEDRRALDAELCADMSALDG--------MGDARIAAAARAIAYRLDAQAVVERAARAETERTVTIRP-APDTMTWVTAL---LPVARGVSVYAALKRAADTTFDDRTRGQVMADTLVERVTGQPAEAAQPVAVNLVLSDETLLAGDRAPAVVDGYGPIPAAVARNLVRDAVADTRSRATLRRL---YRHPRSGALVAMESRARRFPKGLAAFIGLRDQRCRMPYCDAPIRHRDHAQPHHRGGPTTATNGLGSCERCNYVKEAPGWRVSTDTDETGRHTAEFTTPTGMYYHCTAPPLPGPLEIDVSQVEARIGVALTHLHAA |
| 4L9P Chain:B ((68-519)) | VHPGIPALFREPPLIHDLLSTETTELQSETVNKCLPLLKGIHNSQKGPFNKYGIPALQRKDHLEYLYD--------------SLEDYPASFVALDASRPWMVYWALAGLCLL--------GEDVTRFRERVISTFTAAQNSTGGIGGGH-GQMSHVASSYAAVLSIAMVGG------------EEAFKLIDRKAM-WKWLGKLKQPDGGFTVCEGGEEDVRGAYCAMVVHALLDLPLALPPEAEARQNGLETFTDGLPEYLSRCQTYEGGISGSPGSEAHGAYAFCALACLCLLGRPEVVVPRYMNIATLLPWLSARQYAP------EGGFSG-RTNKLVDGCYSHWVGNCWPLVQAALDGTQPLAGPKRSSVGNLYSREGLTRYILSCCQCKLGGLRDKPGKHPDSYHTCYALTGLSTV---QYYHYCTDSS-VSSKDDFSSAFSWKHDPNFA----SDGQGSDIGVFTENDRLV-----PFHPIFVIPHKSAEDIRVWFENQSFDL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43748 for 3672 contacts (-11.9/contact) +
2D Compatibility (PS) -43433 + (NN) -5483 + (LL) 4056
1D Compatibility (HY) -6800 + (ID) 4400
Total energy: -99808.0 ( -27.18 by residue)
QMean score : 0.207
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