Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSLDNTADEKPAIDPILLKVLDAVPFRLSIDD-GIEAVRQRLRDL----PRQPVHPELRVVDLAIDGPAGPIGTRIYWPPTCPDQAEAPVVLYFHGGGFVMGDLDTHDGTCRQHAVGADAIVVSVDYRLAPEHPYPAAIEDAWAATRWVAEHGRQVGADLGRIAVAGDSAGGTIAAVIAQRARDMGGPPIVFQLLWYPSTLWDQSLPSLAENADAPILDVKAIAAFS----RWYAGEIDLHNPPAPMAPGRAENLADLPPAYIAVAGYDPLRDDGIRYGELLAAAGVPVEVHNAQTLVHGYVGYAGVVPAATEATNRGLVALRVVLHG |
| 3AIL Chain:D ((41-322)) | ---------------------------------ASVEEIRSLFKQFSSLTPREEVG---KIEDITIPGSETNIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVTAILSKKE-NIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPI------LADLNDLPPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVRFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFYG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AIL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -182910 for 2466 contacts (-74.2/contact) +
2D Compatibility (PS) -29754 + (NN) -17845 + (LL) 1788
1D Compatibility (HY) -22400 + (ID) 4950
Total energy: -256071.0 ( -103.84 by residue)
QMean score : 0.535
|
|
|