Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNHTYRVIEIVGTSPDGVDAAIQGGLARAAQTMRALDWFEVQSIRGHLVDGAVAHFQVTMKVGFRLEDS
3OQT Chain:E ((1-70))
MSNHTYRVIEIVGTSPDGVDAAIQGGLARAAQTMRALDWFEVQSIRGHLVDGAVAHFQVTMKVGFRLEDS
General information:
TITO was launched using:
RESULT:
Template:
3OQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37385 for 427 contacts (-87.6/contact) +
2D Compatibility (PS) -7698 + (NN) -2344 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 3500
Total energy: -60527.0 ( -141.75 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_3OQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OQT-query.scw
PDB file :
Tito_Scwrl_3OQT.pdb
: