Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDLAGTTRLLRAQGVTAPAGFRAAGVAAGIKASGALDLALVFNEGPDYAAAGVFTRNQVKAAPVLWTQQVLTTGRLRAVILNSGGANACTGPAGFADTHATAEAVAAALSDWGTETGAIEVAVCSTGLIGDRLPMDKLLAGVAHVVHEMHGGLVGGDEAAHAIMTTDNVPKQVALHHHDNWTVGGMAKGAGMLAPSLATMLCVLTTDAAAEPAALERALRRAAAATFDRLDIDGSCSTNDTVLLLSSG-ASEIPPAQADLDEAVLRVCDDLCAQLQADAEGVTKRVTVTVTGAATEDDALVAARQIARDSLVKTALFGSDPNWGRVLAAVGMAPITLDPDRISVSFNGAAVCVHGVGAPGAREVD---------LSDADIDITVDLGVGDGQARIRTTDLSHAYVEENSAYSS |
1VZ7 Chain:D ((9-390)) | ------------------PRGFVVHTAPVGLADDGRDDFTVLAS--PATVSA-VFTRSRFAGPSVVLCREAVADGQARGVVVLARNANVATGLEGEENAREVREAVARAL---GLPEG--EMLIASTGVIGRQYPMESIREHLKTL--EWPAGEGGFDRAARAIMTTDTRPKEVRVSVG-GATLVGIAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAGEVDAGE--FEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPP-------DDALRAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VZ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181195 for 3293 contacts (-55.0/contact) +
2D Compatibility (PS) -39496 + (NN) -15794 + (LL) 1900
1D Compatibility (HY) -17600 + (ID) 6500
Total energy: -258685.0 ( -78.56 by residue)
QMean score : 0.408
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