Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRA--MGVE---IEV-VDADQHAADGCELVLVLGGDGTFLRAAELARNASIPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQDYRVEDRLTLDVVVRQGGRIVNRGWALNEVSLEKGPRLGVLGVVVEIDGRPVSAFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRPMVTSPEATIAIEIEAD-GHDALVFCDGRREMLIPAGSRLEVTRCVTSVKWARL--DSAPFTDRLVRKFRLPVTGWRGK |
3PFN Chain:A ((36-360)) | -KSPKSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVEKKVLEDP-------AIASDESFGAVKKKFCTFREDYDDISNQIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRLKVRVV---KQAMQYQVLNEVVIDRGPSSYLSNVDVYLDGHLITTVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITPICPHSLSFRPIVVPAGVELKIMLSPEARNTAWVSFDGRKRQEIRHGDSISITTSCYPLPSICVRDPVSDWFESLAQCLH--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171365 for 2338 contacts (-73.3/contact) +
2D Compatibility (PS) -31581 + (NN) -15419 + (LL) 440
1D Compatibility (HY) -16800 + (ID) 3750
Total energy: -238475.0 ( -102.00 by residue)
QMean score : 0.445
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