Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLAEGSTFAGFTIVRQLGSGGMGEVYLARHPRLPRQDALKVL-RADVSADG-EYRARFNREADAAASLWHPHIVAVHDRGEFDGQLWIDMDFVDGTDTVSLLRDRYPNGMPGPEVTEI-----------ITAVAEALDYAHERRLLHRDVKPANILIANPDSPDRRIMLADFGIAGWVDDPSGLTATNMTVGTVSYAAPEQLMGNELDGRADQYALAATAFHLLTGSPPFQHANPAVVISQHLSASPPAIGDRVPELTPLDPVFAKALAKQPKDRYQRCVDFARALGHRLGGAGDPDDTRVSQPVAVAAPAKRSLLRTAVIVPAVLAMLLVMAVAVAVREFQRADDERAAQPARTRTTTSAGTTTSVAPASTTRPAPTTPTTTGAADTATASPTAAVVAIGALCFPLGSTGTTKTGATAYCSTLQGTNTTIWSLTEDTVASPTVTATADPTEAPLPIEQESPIRVCMQQTGQTRRECREEIRRSNGWP |
| 4BYJ Chain:A ((15-212)) | -----------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR--REVEIQSHLRHPNILRLYGY------------FHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE----LKIAD---------------------TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BYJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50584 for 1144 contacts (-44.2/contact) +
2D Compatibility (PS) -18661 + (NN) -14268 + (LL) 17404
1D Compatibility (HY) -12800 + (ID) 3250
Total energy: -82159.0 ( -71.82 by residue)
QMean score : 0.437
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