Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYRYQVRVQQRRSEMNRWVATRSRRHTYQWITDHKSPRDHYRHISELRTSIATSSPGRCDMSPIPRIVSVSLAWAAAIGLMVPIGLAPPAMAAPCSGDAANAPPPPSAIVTDPGATALGPVRPGHGPIPTGRKPRGANDRAPLPKLGPLISALLNPGARNAAPLQQQALVPRANPGPNPAPNPPATGPQPPNATQLTPNPAPAPDPAPAAAPDPGATLAGATTSLAEWVTGPDSPNKTLERFGISGTDLGIPWDNGDPANRQVLMIFGDTFGYCAVDGHQWRYNTLFRSQDRDLGNGVHVTSGDASNRYSGSPVRQPGFSKQLINSIKWARDETGIIPTAGIAVGKTQYVNFMSIRNWGRDGEWTTNYSGIAVSKDNGQTWGVFPGTIRASGPDSGGKARFVPGNENFQMGAYLKSNDGYLYSFGTPPG------RGGSAYLARVPQRFVPDLTKYQYWNGDSNSWVPNKPDAATPVIP---GPVGE-MSVQYNTYLKQYLALYTNGM----NDVVARTAPAPQGPWSAEQMLVSSWQMPGGIYAPMMHPWSTGKDVYFNLSLWSAYNVMLMHTVLP |
| 2EXH Chain:A ((70-228)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGGVWAPHLSYSDGKFWLIYTDVKVVE--GQWKDGHNYLVTCDTIDGAWSDPIY---L-------------NSSGFDPSLFHD-EDGRKYLVNMYWDHRVDHHPFYGIVLQEYSVEQK--------------KLVGEP----KIIFKGTDLRITEGPHLYKIN--GYYYLLTAEGGTRYNHAATIARSTSLYGPYEVH----------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -36267 for 1057 contacts (-34.3/contact) +
2D Compatibility (PS) -15713 + (NN) -8952 + (LL) 14744
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -50188.0 ( -47.48 by residue)
QMean score : 0.367
|
|
|