Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDFDTERVSRAVAAALV---GPGGVALVVKV------FAGL--PG-VIHTPARRGFFRSNPERIQIGDWRYEVAHDGRLLAAHMVNGIVIAEDALIAEAVGPHLARALGQIVSRYGATVIPNINAAIEVLGTGTDYRF
1A8R Chain:A ((151-208))
-----QERLTQQILIALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQN----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1A8R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7692 for 232 contacts (-33.2/contact) +
2D Compatibility (PS) -5546 + (NN) -5362 + (LL) 6212
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -14188.0 ( -61.16 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_1A8R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A8R-query.scw
PDB file :
Tito_Scwrl_1A8R.pdb
: