Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPGRTSIGVKIRDKVQDKVIAITGGARGIGLATAAALHNLGAKVAIGDIDEAMAKESGADLDLDMYGKLDVTDPDSFSGFLDAVERQLGPIDVLVNNAGIMPV-GRIVDEPD-PVTRRILDINVYGVILGSKLAAQRMVPRGRGHVINVASLAGEI-YAVGVATYCASKHAVVAFTDSARLEYRSAGVKFSMVLPSFVNTELIAGTGGIKGFKNAEPADIADAIVGLIVHPKPRVRVTKAAGSMIVAQRFMPRQVSEGLNRLLGGEHVFTDDVDMEKRRTYEARARGEE |
4WEC Chain:B ((25-215)) | -----------TQRLAGKVAVITGGASGIGLATGRRLRAEGATVVVGDIDPTTGKAAADELE-GLFVPVDVSEQEAVDNLFDTAASTFGRVDIAFNNAGISPPEDDLIENTDLPAWQRVQDINLKSVYLSCRAALRHMVPAGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQYARQGIRVNALCPGPVNTPLL-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WEC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97740 for 1578 contacts (-61.9/contact) +
2D Compatibility (PS) -19910 + (NN) -2275 + (LL) 6108
1D Compatibility (HY) -12400 + (ID) 3300
Total energy: -129517.0 ( -82.08 by residue)
QMean score : 0.476
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