Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGDLPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP
6FD1 Chain:A ((2-74))
--FVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAEL---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
6FD1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60374 for 506 contacts (-119.3/contact) +
2D Compatibility (PS) -7474 + (NN) -5054 + (LL) 1704
1D Compatibility (HY) -9600 + (ID) 1500
Total energy: -82298.0 ( -162.64 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_6FD1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-6FD1-query.scw
PDB file :
Tito_Scwrl_6FD1.pdb
: