Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSPDPYAALPKLPSFSLTSTSITDGQPLATPQVSGI----MGA--GGADASPQLRWSGFPSETRSFAVTVYDPDAPT--LSGFWHWAVANLPANVTELPEGVGDGRELPGGALTL-------------------VNDAGMRRYVGAAPPPGHGVHRYYVAVHAVKVEKLDLPEDASPAYLGFNLFQHAIARAVIFGTYEQR
2EVV Chain:A ((23-202))
-------------MKTFEVMIQTDS-KGYLDAKFG-GNAPKAFLNSNGLPTYSPKISWQKVE-GAQSYALELIDHDAQKVCGMPFVHWVVGNIAHNV--LEENASM---MDKRIVQGVNSLTQGFIRSPLNESEKQRSNLNNSVYIGPMPPNG--DHHYLIQVYALDIPKLALKAPFFLGDLHDKMRNHIIAIGRKEFLYKQF
General information:
TITO was launched using:
RESULT:
Template:
2EVV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78924 for 1172 contacts (-67.3/contact) +
2D Compatibility (PS) -16522 + (NN) -14040 + (LL) 336
1D Compatibility (HY) -8000 + (ID) 1950
Total energy: -119100.0 ( -101.62 by residue)
QMean score : 0.278
(partial model without unconserved sides chains):
PDB file :
Tito_2EVV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EVV-query.scw
PDB file :
Tito_Scwrl_2EVV.pdb
: