Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGSIRSKLSAIDVRQLGTVDYRTAWQLQRELADARVAGGA-DTLLLLEHPAVYTAGRRTETHE-R-----PIDGTPVVDTDRGGKITWHGPGQLVGYPIIGLAEPLDVVNYVRRLEESLIQVCADL--GLHAGRVDGRSGVWLPGRPARKVAAIGVRVSRATTLHGFALNCDCDLAAFTAIV-P--CGISD-------AAVTSLSAELGRTVTVDEVRATVAAAVCAALDGVLPVGDRVPSHAVPSPL
2E5A Chain:A ((5-231))
-----------GLILQSISNDVYHNLAVEDWIHDHMN-LEGKPVLFLWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNIN-LTFFTTKKKYDRM----ENLKLVVRALKAVHPHLDVQAT-KRFDLLLDG--QFKISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLKSPYQGIRSNATASTPALVKNLMEKDP-TLTCEVVINAVATEYATSHQIDN---------------
General information:
TITO was launched using:
RESULT:
Template:
2E5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116258 for 1520 contacts (-76.5/contact) +
2D Compatibility (PS) -21188 + (NN) -9184 + (LL) 1128
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -154752.0 ( -101.81 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_2E5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E5A-query.scw
PDB file :
Tito_Scwrl_2E5A.pdb
: