Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEQTIYGANTPGGSGPRTKIRTHHLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGD-AAEQTIADAIAVAEAGAFAVVMEMVPAELATQITGKLTIPTVGIGAGPNCDGQVLVWQDMAGFSGAKTARFVKRYADVGGELRRAAMQYAQEVAGGVFPADEHSF
1M3U Chain:C ((9-263))-------------------------LQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAY-ATPEQAFENAATVMR-AGANMVKIEGGEWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSF


General information:
TITO was launched using:
RESULT:

Template: 1M3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -196892 for 2248 contacts (-87.6/contact) +
2D Compatibility (PS) -28037 + (NN) -12321 + (LL) 560
1D Compatibility (HY) -22400 + (ID) 5900
Total energy: -264990.0 ( -117.88 by residue)
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_1M3U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M3U-query.scw
PDB file : Tito_Scwrl_1M3U.pdb: