Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAV-RVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEHL-AADLLVALDRNHARLLRQLGVEA--ARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLARNGPS
1D1P Chain:B ((7-148))
----ISVAFICLGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKINHKGKQIKTKHFDEYDYIIGMDESNINNLKKIQPEGSKAKVCLFGDWNTNDGTVQTIIEDPWYGDIQDFEYNFKQI---------------------
General information:
TITO was launched using:
RESULT:
Template:
1D1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88996 for 1086 contacts (-81.9/contact) +
2D Compatibility (PS) -15241 + (NN) -8797 + (LL) 668
1D Compatibility (HY) -12400 + (ID) 2400
Total energy: -127166.0 ( -117.10 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_1D1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D1P-query.scw
PDB file :
Tito_Scwrl_1D1P.pdb
: