Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWG--LTNFDRVDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGVRAKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHADLLTRLKDDEDLRAVCQDLVRRFLSTKVGPRQGATATQEQVCMDYICAEAPLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE |
2G36 Chain:A ((16-108)) | -----------------------------------------------------------------------------------LSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTH---YDDVS----KLK----EYTRDLVRGFLACGIDPEKSVIFVQSGVKEHAE--------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2G36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -21629 for 542 contacts (-39.9/contact) +
2D Compatibility (PS) -8950 + (NN) -2934 + (LL) 11964
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -24799.0 ( -45.75 by residue)
QMean score : 0.197
|
|
|