Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTAMRGDIRAARERDPAAPTALEVIFCYPGVHAVWGHRLAHWLWQRGARLLARAAAEFTRILTGVDIHPGAVIGARVFIDHATGVVIGETAEVGDDVTIYHGVTLGGSGMVGGKRHPTVGDRVIIGAGAKVLGPIKIGEDSRIGANAVVVKPVPPSAVVVGVPGQVIGQSQPSPGGPFDWRLPDLVGASLDSLLTRVARLEALGGGPQAAGVIRPPEAGIWHGEDFSI
4N69 Chain:B ((88-255))
LRSAAVADLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWRQSRRPLALALHSRIANVFAVDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPPRTTAVGNPARLV-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4N69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131421 for 1381 contacts (-95.2/contact) +
2D Compatibility (PS) -18890 + (NN) -13296 + (LL) 1884
1D Compatibility (HY) -13200 + (ID) 4200
Total energy: -179123.0 ( -129.71 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_4N69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N69-query.scw
PDB file :
Tito_Scwrl_4N69.pdb
: