Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAV---PEPGWSAVIPAFNASEQGRGVQVITSYGASADQSRGVADGKPADLVNFSVEPDIARLVKAGKVDK--DWD----AD--A-----------TKGIPFG-SVVTFVVRAGNPK--NIRDWDDLLRPGIEVITPS-------PLSS----GS--A-KW-NLLAPYAAKSDG--G---RN--N---QAGIDFVNTLVNEHVKL--RP--GSGREATDVFVQGSGDVLISYENEAIATER--AGKPVQHV-TPPQ---TFKIENPLAVVA---TSTHLGAATAFRNFQYTVQAQKLWAQ--------AGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 4KYS Chain:A ((62-381)) | -------------------------------------------------------QTLNVALYEYVPDPIRFKKAVETEWNKKEPNIKLNFVD----WDCYSED--PPKDLDVFVFDA-VYLSHFVKEGYLSEIPEKDIKNKEDILPFAMEGCTIKGSAYAIPQIISTNLLFSRKGDYDIQKVNSVYDLYDKLGKFTSEDIILPNNKGLLIDMSGGTSKACMYLDSLIDTTQEYTKFCSLPNLNELNKDAIESLVLLQSM-AGKSQANYWPENNDSYIRAKWFINGKGRAYIGYTEAMSQMKEFANDIDFKTISLSKNSNIPIFYGDVVGINSSITNSYKKEKAIELANIITDKNTMVKAVSPDENNKYPQYLLPARRSVYHN-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28648 for 1773 contacts (-16.2/contact) +
2D Compatibility (PS) -27506 + (NN) -16707 + (LL) 5984
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -78027.0 ( -44.01 by residue)
QMean score : 0.381
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