Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEKLKAALPEYAKDIKLNLSSITRSSVLDQEQLWGTLLASAAATRNPQVLADIGAEATDHLSAAARHAALG-AAAIMG--MNNVFYRGRGFLEGRYDDLRPGLRM------NII-ANPGIPKANFELWSFAVSAINGCSHCLVAHEHTLRTVGVDREAIFEALKAAAIVSGVAQALATIEALSPS
2OUW Chain:A ((17-118))
-----------------------------------------------------------------PEVKAVFDDIRATRGSDFVNNIWRG-------LANDPALLKRTWEQVKTVMVGEGALDPLTREMIYLAVSTANSCSYCAHSHTAAARAKGMTPAQHAEVLAIIGLAAQT-------------
General information:
TITO was launched using:
RESULT:
Template:
2OUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30980 for 525 contacts (-59.0/contact) +
2D Compatibility (PS) -10287 + (NN) -7708 + (LL) 6680
1D Compatibility (HY) -1200 + (ID) 1000
Total energy: -44495.0 ( -84.75 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_2OUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OUW-query.scw
PDB file :
Tito_Scwrl_2OUW.pdb
: