Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYARKYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIKTFS
4LWS Chain:A ((35-126))
--QSAVDRAAMAQAAQDIEQSANAIRGMQNQLASAKDQL----RSHWEGDASMAFEAVFNRFNEDFSRVLKALDGMHESLVQTRITYEAREEAAQQSV-
General information:
TITO was launched using:
RESULT:
Template:
4LWS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12259 for 466 contacts (-26.3/contact) +
2D Compatibility (PS) -9902 + (NN) -1434 + (LL) 116
1D Compatibility (HY) -400 + (ID) 500
Total energy: -24379.0 ( -52.32 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_4LWS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LWS-query.scw
PDB file :
Tito_Scwrl_4LWS.pdb
: