Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTVRAEHCRGAGGCDECPSVMPEHPTALFHDVAAIALAQPGAEPGAMMGFPCRPALLPHLSRAVMRCVRTRSASTSLGVSVIAGQLPAAGSRHRLGAPCRHVRWWLASDGHWGMVSYIPTALNVSMGGIVGWRCVP--------------------------------------------------------- |
| 4KRT Chain:A ((7-353)) | HHHHHMQSRNNNNLKGIDVSNWKGNINFESVKNDGVEVVYIKATEGNYFKDKYAKQNYEGAKEQGLSVGFYHFFRANKGAKDQANFFIDYLNEIGAVNYDCKLALDIETTEGVGVRDLTSMCIEFLEEVKRLTGKEVVVYTYTSFANNNLDSRLGNYPVWIAHYGVNTPGANNIWSSWVGFQYSENGSVAGVNG----GCDMNEFTEEIFIDSS---------------NFNLDNATTKNVSTKLN--IRAKGTTNSK----IIGSIPAGETFKIKWVDEDYLGWYYVEYN--GVVGYVNADYVEKLQMATTYNVSTFLNVREEGSLNSRIVDKINSGDIFRIDWVDSDFIGWYRITTKNGKVGFVNAEFVKKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30904 for 610 contacts (-50.7/contact) +
2D Compatibility (PS) -11171 + (NN) 527 + (LL) 1796
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -44302.0 ( -72.63 by residue)
QMean score : -0.002
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