Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGGLTISDLVVEYSSGGYAVRPIDGLSLDVAPGSLVILLGPSGCGKTTLLSCLGGILRPKSGSIKFDDVDITTLEGAALAKYRRDKVGIVFQAFNLVSSLTALENV-MVPLRAAGVSRAAARKRAEDLLIRVNLGERMKHRPGDMSGGQQQRVAVARAIALDPQLILADEPTAHLDFIQVEEVLRLIRSLAQGDRVVVVATHDSRML-PLADRVLELMPAQVSPNQPPETVHVKAGEVLFEQSTMGDLIYVVSEGEFEIVRELADGGEELVKTAAPGDYFGEIGVLFHLPRSATVRARSDATAVGYTAQAFRERLGVTRVADLIEHRELASE
4YMV Chain:A ((8-227))------------YKNFG-SLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKINN--GKVNINKVRQKVGMVFQHFNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLAKVGLLDKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANEGMTMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRA-------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134234 for 1720 contacts (-78.0/contact) +
2D Compatibility (PS) -24286 + (NN) -17616 + (LL) 8612
1D Compatibility (HY) -20400 + (ID) 4100
Total energy: -192024.0 ( -111.64 by residue)
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_4YMV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMV-query.scw
PDB file : Tito_Scwrl_4YMV.pdb: