Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVVAVT---IFVAAYVLIASDRVNKTMVALTGAAAVVVLPVITS--HDIFYSHDTGIDWDVIFLLVGMMIIVGVLRQTGVFEYTAIWAA-KRARGS-PLRIMILLVLVSALASALLDNVTTVLLIAPVTLLVCDRLNINTTSFLMAEVFASNIGGAATLVGDPPNIIV-ASRAGLT-----------FNDFMLHLTPLVVIVLIAL-I-AVLPRLFGSITV-EA-DRIADVMALDEGEAIRDRGLLVKCGAVLVLVFAAFVAHPVLHIQPSLVALLGAGMLIV-VSGLTRSEY-LSSVEWDTLLFFAG-----LFIMVGALVKTGVVNDLARAATQLTGGNIVATAFLILGVSAPISGIIDNIPYVATMTPLVAELVAVMGGQPSTDTPWWALALGAD-FGGNLTAIGASANVVMLGIARRAGAPISFWEFTRKGAVVTAVSIALAAIYLWLR-YFVLL-H-- |
| 4DNH Chain:A ((2-387)) | LVSIDLPIEGRLARYDLTGRPVPFNSRDAKAFSRVAFAAAHVVADPLADNDPWLAPAIDWERTLAFRHRLWDLGL----GVAE------SMDTAQRGMGLGWPEARELIRRSLAEARGRPDALIACGAGTDHL--APGPDVSIDDILAAYESQIEAIEAEGGR---IILMASRALAAAAKGPEDYIRVYDRVLSQVKEPVIIHWLGEMFDPALEGYWGNADHMAAMKTCLDVLEAHAAK-----------------------------VDGIKISLLSKEKEIVMRRQLPKGVRMYTGDDFNYAELIAGDEEGHSDALLGIFDA--IAPVASAALEALGSGR-NGEFFELLEPTVPLSRHIFKAP-TRFYKTGVVFLAYLNGLQD-----------HFVMIGGQQSARSLVHLAELFRLADKAGA------LADPELATA-------------RMRRVLAMHGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DNH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -395653 for 2970 contacts (-133.2/contact) +
2D Compatibility (PS) -37738 + (NN) -7788 + (LL) 7268
1D Compatibility (HY) 1200 + (ID) 3150
Total energy: -435861.0 ( -146.75 by residue)
QMean score : 0.258
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