Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
1SLH Chain:B ((23-162))
--TTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGD------------
General information:
TITO was launched using:
RESULT:
Template:
1SLH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90290 for 917 contacts (-98.5/contact) +
2D Compatibility (PS) -15256 + (NN) -5390 + (LL) -356
1D Compatibility (HY) -19200 + (ID) 7000
Total energy: -137492.0 ( -149.94 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_1SLH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SLH-query.scw
PDB file :
Tito_Scwrl_1SLH.pdb
: