Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLDLTGRTAIITGASRGIGLAIAQQLAAAGAHVVLT-ARRQEAAD---EAAAQVGDRALGVGAHAVDEDAARRCVDLTLERFGSVDILINNAGTNPAYGPLLEQDHARFAKIFDVNLWAPLMWTSLVVTAWMGEHGGAVVNTASIGGMHQSPAMGMYNATKAALIHVTKQLALELSPR-IRVNAICPGVVRTR---LAEALWKDHEDPLAATIALGRIGEPADIASAVAFLVSDAASWITGETMIIDGGLLLGNALGFRAAPSTEH
4MOW Chain:B ((12-255))
-----LAGKVAIVTGASKGIGAAIAKALADEGAAVVVNYASSKAGADAVVSAITEAGGRAVAVGGDVSKAADAQRIVDTAIETYGRLDVLVNNSGVYE-FAPIEAITEEHYRRQFDTNVFGVLLTTQAAVK-HLGE-GASIINISSVVTSITPPASAVYSGTKGAVDAITGVLALELGPRKIRVNAINPGMIVTEGTHSA---GSDLEAQVLGQTPLGRLGEPNDIASVAVFLASDDARWMTGEHLVVSGGL----------------
General information:
TITO was launched using:
RESULT:
Template:
4MOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178952 for 1998 contacts (-89.6/contact) +
2D Compatibility (PS) -24927 + (NN) -4479 + (LL) 1888
1D Compatibility (HY) -14400 + (ID) 5000
Total energy: -225870.0 ( -113.05 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_4MOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MOW-query.scw
PDB file :
Tito_Scwrl_4MOW.pdb
: