Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH
1YL7 Chain:E ((2-245))
-RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH
General information:
TITO was launched using:
RESULT:
Template:
1YL7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -175470 for 2213 contacts (-79.3/contact) +
2D Compatibility (PS) -26611 + (NN) -15604 + (LL) 208
1D Compatibility (HY) -30800 + (ID) 12150
Total energy: -260427.0 ( -117.68 by residue)
QMean score : 0.768
(partial model without unconserved sides chains):
PDB file :
Tito_1YL7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YL7-query.scw
PDB file :
Tito_Scwrl_1YL7.pdb
: