Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIARETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQV------PGESYEHGNRLRCYVVGVTRGAREPLITLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMGQRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDAPPPPPGQPEPGVSRGMAHDR |
4NNG Chain:A ((292-364)) | -------------------------------------------------------------------------------------------------------------AIGQIVAGKVTKLVP----FGAFVRVEE---GIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLER--RRISLSLKQ------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NNG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30191 for 451 contacts (-66.9/contact) +
2D Compatibility (PS) -7301 + (NN) -3297 + (LL) 18676
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -26113.0 ( -57.90 by residue)
QMean score : 0.648
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