Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAPDVRLTAWVHGWVQGVGFRWWTRCRALELGLTGYAANHADGRVLVVAQGPRAACQKLLQLLQGDTTPGRVAKVVADWSQSTEQITGFSER
4OJ3 Chain:B ((15-99))
------RMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKPDYSFSEYKGEFEDFE--
General information:
TITO was launched using:
RESULT:
Template:
4OJ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60612 for 622 contacts (-97.4/contact) +
2D Compatibility (PS) -9574 + (NN) -6331 + (LL) 504
1D Compatibility (HY) -6800 + (ID) 1650
Total energy: -84463.0 ( -135.79 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_4OJ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OJ3-query.scw
PDB file :
Tito_Scwrl_4OJ3.pdb
: