Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRGKYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAV--PCAAHVRISALLDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK
3U6O Chain:A ((1-272))
-PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIR-HPRDSEAFAARMIGQTVRGLERRGKFLKFLLD--------RDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRP---PLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVM----------------------HLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQ-----
General information:
TITO was launched using:
RESULT:
Template:
3U6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148201 for 2011 contacts (-73.7/contact) +
2D Compatibility (PS) -26507 + (NN) -10295 + (LL) 1232
1D Compatibility (HY) -15200 + (ID) 4400
Total energy: -203371.0 ( -101.13 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_3U6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U6O-query.scw
PDB file :
Tito_Scwrl_3U6O.pdb
: