Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYT---GF
1WA8 Chain:A ((1-99))
-AEMKTDAATLAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQQALSSQMGF
General information:
TITO was launched using:
RESULT:
Template:
1WA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20518 for 536 contacts (-38.3/contact) +
2D Compatibility (PS) -10508 + (NN) -5659 + (LL) 208
1D Compatibility (HY) 400 + (ID) 1350
Total energy: -37427.0 ( -69.83 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_1WA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WA8-query.scw
PDB file :
Tito_Scwrl_1WA8.pdb
: