Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTASTALTVAIWIGVMLIGGIGSVLRFLVDRSVARRLARTFPYGTLTVNITGAALLGFLAGLALPKDAALLAGTGFVGAYTTFSTWMLETQRLGEDRQMVSALANIVVSVVLGLAAALLGQWIAQI-
4KVH Chain:A ((2-112))
NAMDRVATARAYYRALDEHD---------YDLLSDVLAPDFVHDRPDRTIEGRERFVRFMREERPQTDT---SHPIATIYTGASTVAVEGRLLNSDGAEITQFVDVFAFE----DGVIGRIRTHTPE
General information:
TITO was launched using:
RESULT:
Template:
4KVH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63355 for 743 contacts (-85.3/contact) +
2D Compatibility (PS) -11385 + (NN) -862 + (LL) 1840
1D Compatibility (HY) 2000 + (ID) 700
Total energy: -72462.0 ( -97.53 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_4KVH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KVH-query.scw
PDB file :
Tito_Scwrl_4KVH.pdb
: