Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEPAIGAIDRLQRSSRDVTTLPAVISRWLSSVLPGG-A---APEVTVESGVDSTGMSSETIILTARWQQD-GRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRSWYDFAVEG-------------IGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLA----TLPGLPEVMREDDVRATYQALTGVE------------LGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH |
| 1NW1 Chain:A ((48-396)) | ------------------TIPELKERAHMLCARFLGGAWKTVPLEHLRIS--RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-----TESHLVAESVIFTLLSER-HL-GPKLYGIF-------SGGRLEEYIPSRPLSCHE-----------I---SLAHMSTKIAKRVAKVHQLEVPIWK--EPD-------YLCEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNCLDLARELEFLRAHISLS--KSPVTFCHNDLQEGNILLPK--RLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVE-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174160 for 2141 contacts (-81.3/contact) +
2D Compatibility (PS) -30260 + (NN) -10361 + (LL) 4440
1D Compatibility (HY) -11200 + (ID) 2150
Total energy: -223691.0 ( -104.48 by residue)
QMean score : 0.338
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