Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSWPAAAVDRVIKAYDVRGLVGEEIDESLVTDLGAAFARLMRTEDARPVVIGHDMRDSSPSLADAFAAGVTGQGLDVVRVGLASTDQLYFASGLLD-CPGAMFTASHNPAAYNGIKMCRAAAKPVGADTGLTAIRDDLIAGVARYDGTPGTIADQDVLVDYGAFLRSLVDTSGLRPLRVAVDAGNGMAGHTAPAVLGVIDSITLLPSYFELDGSFPNHEANPLDPANLVDLQAYVRDTGADIGLAFDGDADRCFVVDERGQPVSPSTVTALVAARELNREIGATIIHNVITSRAVPELVAERGGTPLRSRVGHSYIKALMAETGAIFGGEHSAHYYFRDF-WGADSGMLAALHVLAALGEQSRPLSELTADYQRYE-SS-GEINFTVVDSSACVEAVLKSFGNRI----VSIDHLDGVTVDLGDDSWFNLRSSNTEPLLRLNVEGRSVGDVDAVVRQVSAEIAAQSAHAKAGP |
| 1P5D Chain:X ((9-458)) | ------LPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGSHNPPDYNGFKIVVA-GETLANEQI-QALRERIEKNDL--ASGVGSVEQVDILPRYFKQIRDDIA--MAKPMKVVVDCGNGVAGVIAPQLIEAL-GCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTED----SKFAIIEALQRDAQWGEGNITTLDGVRVDY-PKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAVDSS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232251 for 4107 contacts (-56.6/contact) +
2D Compatibility (PS) -46397 + (NN) -15650 + (LL) 824
1D Compatibility (HY) -28800 + (ID) 7150
Total energy: -329424.0 ( -80.21 by residue)
QMean score : 0.483
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