Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIR--HGDVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLT-PLRHWRSALATALAAPANSTSIDRRLPSTRD |
| 3SC6 Chain:A ((5-285)) | ----KERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDR----PEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKY-GNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTS-LYGTYHVSNTGSCSWFEFAKKIFSYANMKV-NVLPVSTEEFGAAAARPKYSIFQ-HNMLRLNGFLQMPSWEEGLERFFIETK-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130027 for 2423 contacts (-53.7/contact) +
2D Compatibility (PS) -31139 + (NN) -19673 + (LL) 848
1D Compatibility (HY) -22000 + (ID) 5000
Total energy: -206991.0 ( -85.43 by residue)
QMean score : 0.502
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