Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRFWENVGKPNDTTDGRGTTSLAMTPISQTPGLLAEAMVDLGAIEHNVR--VLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLA-DVQVAVSSLRQLDELLHAVRRTGRTAT-VTVKVDTGLNRNG-VGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPV--PALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYREAENR |
| 3E6E Chain:C ((13-370)) | ---------------------------------------IDTQAITENVQKECQRLPEGTA-LFAVVKANGYGHGAVESAKAAKKGGATGFCVALLDEAIELREAGVQDPILI-LSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNTPLRVHLKVDTGMGRIGFLTPEETK---QAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQAGRFKAVLA-VLEELPRY--VHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKPALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQG-FTVLVNGKRCEIVGRVCMDQCMIRLAE---EVPVGPVVTLVGKDGNEENTLQMVAEKLETIHYEVACTFSQRIPREY------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3E6E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -224316 for 2863 contacts (-78.3/contact) +
2D Compatibility (PS) -38561 + (NN) -11687 + (LL) 3416
1D Compatibility (HY) -28400 + (ID) 6850
Total energy: -306398.0 ( -107.02 by residue)
QMean score : 0.359
|
|
|