Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQDVVDEILAAGGQAVADGSDISDWDQAANLIQAAVETYGGVDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAASHWRGLSKAGKAPKDIDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVGAAEMRRYGVTVNAIAPAARTRMTETVFAEMMAKPQEGFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEG-GIIRVAEGWAHGPQVDKGVKWDPAELGPVVSDLLAKSRPPVPVYGA |
4KZP Chain:B ((24-306)) | ---LSGKVAVVTGAAAGLGRAEAIGLAKAGATVVVNDIAGALEGS---------DVLDEIAAAGSKGVAVAGDISQRSTADELVETA-EGLGGLDIVVNNAGITRDRILFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRSKAKAGDGT--VYGRVINTSSEAGLSGPVGQPNYGAAKAGITALTLSAARALERFGVRANAIAPRARTAMTAGVF---------QMDPLSTDHVVTLVQFLAAPASEGVNGQLFIVYGPSVTLVAAPTAEKQFVADEDAWEPADLSVTLRDYFADRDP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108464 for 2253 contacts (-48.1/contact) +
2D Compatibility (PS) -29755 + (NN) -11785 + (LL) 1528
1D Compatibility (HY) -22000 + (ID) 6900
Total energy: -177376.0 ( -78.73 by residue)
QMean score : 0.502
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