Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALDLTAYFDRINYRGATDPTLDVLQDLVTVHSRTIPFENLDPLLGVPVDDLSPQALADKLVLRRRGGYCFEHNGLMGYVLAELGYRVRRFAARVVWKLAPDAPLPPQTHTLLGVTFPGSGGCYLVDVGFGGQTPTSPLRLETGAVQPTTHEPYRLEDRVDGFVLQAMVRDTWQTLYEFTTQTRPQIDLKVASWYASTHPASKFVTGLTAAVITDDARWNLSGRDLAVHRAGGT-EKIRLADAAAVVDTLSERFGINVADIGERGALETRIDELLARQPGADAP |
| 4NV8 Chain:A ((5-265)) | PPFDLDAYLARIGYTGPRNASLDTLKALHFAHPQAIPWENIDPFLGRPVR-LDLAALQDKIVLGGRGGYCFEHNLLFMHALKALGFEVGGLAARVLWGQ-SE-AITARSHMLLRVELDG--RTYIADVGFGGLTLTAPLLLEPGREQKTPHEPFRIVEADDHFRLQAAIGGDWRSLYRFDLQPQYEVDYSVTNYFLSTSPTSHFLSSVIAARAAPDRRYALRGNRLSIHHLGGRTEQTEIATAADLADTLQGLLGIIIPDRTAFE------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131776 for 2093 contacts (-63.0/contact) +
2D Compatibility (PS) -27478 + (NN) -12229 + (LL) 1296
1D Compatibility (HY) -20800 + (ID) 5550
Total energy: -196537.0 ( -93.90 by residue)
QMean score : 0.431
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