Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFKVGDTVVYPHHGAALVEAIETRTIKGEQKEYLVLKVAQGDLTVRVPAENAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLASGDVNKVAEVVRDLWRRDQ-ERGLSAGEKRMLAKARQILVGELALAESTDDAKAETILDEVLAAAS
2EYQ Chain:A ((479-617))
-ELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYAN-DAKLYVPVSSLHL--ISRYAGGAEENAPLHKLG------GDAWSRARQKAAEK-----VRDVAAELLDIYAQRAAKEGFAFKHDR---EQYQLFCDSFPFETTPDQAQAINAVLS------
General information:
TITO was launched using:
RESULT:
Template:
2EYQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19884 for 730 contacts (-27.2/contact) +
2D Compatibility (PS) -14393 + (NN) -10 + (LL) 1708
1D Compatibility (HY) -7200 + (ID) 1600
Total energy: -41379.0 ( -56.68 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_2EYQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EYQ-query.scw
PDB file :
Tito_Scwrl_2EYQ.pdb
: