Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MIQVCSQCGTGWNVRERQRVWCPRCRGMLLAPLADMPAEARWRTPARPQVPTASDTRRTPPRLPPGFRWIAVRPGAAPPPRHGPRLRGPTPRYAGIPRWGLTDHVDQAPVPASAKAGPSP-AAVRTTLLVSLLVFSIAVVVFVVRYVLLVINRNTLLNSVVASASVWLGVLVSLAAIAAAGTTIVLLVRWLVAR---RAAAFMHQGLPERRSARELWAGCLLPMVNLLWAPLYVIELALVEDRYTRLRRPIVVWWIVWIVSNAISMFAFATSWVTDAQGIANNTTMMVLAYLCAAAAVAAAARVFEGFEQKPVERPAHRWVVVNTDGRSAPASSVAVELDGQEPAA |
| 2Y23 Chain:A ((6-312)) | TKEVVVNVDDDGVISLNFE---------CDKM------TPKSEFSWSKD---YVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTD----GIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEIL--EKGQVRFWMQAEKL--SGNAKVNYIFNEKEIFEGPKYKMHIDRNTG-IIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVL--------VGDVFKKLQK-EAEFQRQEWIRKQGPHFVEYLSWEVTGEC-----NVLLKCKVANIKKETHIVWYKDE-REISVDEKHGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127517 for 1910 contacts (-66.8/contact) +
2D Compatibility (PS) -31816 + (NN) -5090 + (LL) 4360
1D Compatibility (HY) -9600 + (ID) 2400
Total energy: -172063.0 ( -90.09 by residue)
QMean score : 0.111
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