Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------------------MGLFGKRKSRATRRAEARAIKARAKLEAKLSAKNEARRIKAAQRAESKALKAQLKARRDSDRAALKVAE-----AELKVAREGKLLSP-------TRIRRLLTVSRLLAPILTPVIYRAAMAARGLIDQRRADQLGVPLAQIGRFS---GHGARLSARVGGAERSLRMVQEKKPKDVETKQFVSAVTNRLTDLSAAVAAAEHMPAKRRRTAHSAISSQLDGIEADLMARLGLT-
3WUQ Chain:A ((3209-3471))
TVDQVEELRRDLRIKSQELEVKNAAANDKLKKMVKDQQEAEKKKVMSQEIQEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGESTTDWKQIRSIIMRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLACGPMVKWAIAQLNYADMLKRVEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKE-EYAVLISEAQAIKADLAAVEAKVN
General information:
TITO was launched using:
RESULT:
Template:
3WUQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 47303 for 1362 contacts (34.7/contact) +
2D Compatibility (PS) -24440 + (NN) -19083 + (LL) 52
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -18.0 ( -0.01 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_3WUQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WUQ-query.scw
PDB file :
Tito_Scwrl_3WUQ.pdb
: