Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISFRPTADLVDD-IGPDVRSCDLQFRQFGGRSQFAGPISTVRCFQDNALLKSVLSQPSAGGVLVIDGAGSLHTALVGDVIAELARSTGWTGLIVHGAVRDAAALRGIDIGIKALGTNPRKSTKTGAGERDVEITLGGVTFVPGDIAYSDDDGIIVV
2PCN Chain:A ((1-152))
-----MKTADLCDQFLD-ELQVCELPFQSYGGKRMFSGPIATVDVFEDNVLVREALETVPPGTVLVVDGKGSRRVALLGDRLAQIACERGLAGVIIHGCIRDSAEIGAMPIGVMAIGTCPVKSKKEGKGARDVVLEFGGVRWEPGAYVYADADGVVVA
General information:
TITO was launched using:
RESULT:
Template:
2PCN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104909 for 1303 contacts (-80.5/contact) +
2D Compatibility (PS) -17418 + (NN) -14861 + (LL) 520
1D Compatibility (HY) -15600 + (ID) 3350
Total energy: -155618.0 ( -119.43 by residue)
QMean score : 0.823
(partial model without unconserved sides chains):
PDB file :
Tito_2PCN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PCN-query.scw
PDB file :
Tito_Scwrl_2PCN.pdb
: