Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
5F0C Chain:A ((26-218))
---------------------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE--
General information:
TITO was launched using:
RESULT:
Template:
5F0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102434 for 1384 contacts (-74.0/contact) +
2D Compatibility (PS) -21269 + (NN) -17137 + (LL) 1092
1D Compatibility (HY) -24800 + (ID) 9650
Total energy: -174198.0 ( -125.87 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_5F0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5F0C-query.scw
PDB file :
Tito_Scwrl_5F0C.pdb
: