Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLTRVSVTAVRNL-HPVTLSPSPRINILYGDNGSGKTSVLEAIHLLGLARSFRSARLQPVIQYEEAACTVFGQVMLANGIASNLGISRERQGEFTIRIDGQNARSAAQLAETLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPVWQRLQKALRQRNSWLRHGKLDPASQAAWDRELSLASDEIDAYRRSYIQALKPVFEETLAELVSLDDLTLSYYRGWDKDRDLLEVLASSLLRDQQMGHTQAGPQRADLRIRLAGHNAAEILSRGQQKLVVCALRIAQGHLINRAKRGQCVYLVDDLPSELDEQHRMALCRLLEDL-GCQVFITCVDPQLLKDGWRTDTPVSMFHVEHGKVSQTTTIGSEA |
1E69 Chain:A ((1-1164)) | MRLKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWV----------------FGEKFDMIFAGSE-----------NLPPAGSAYVELVFEENGEEITVARELKR---TGENTYYLNGSPVRLKDIRDR-------------------------FAGTGLGVDFYSIVGQGQIDRIVNAYQRVNESFNRFISLLFFGGEGRL------------------------------------------EISIRKPGRRDQKLSLLSGGEKALVGLALLFAL-----MEIKPSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKIVMEAADLLHGVTM----VNGVSAIVPVEV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110053 for 2026 contacts (-54.3/contact) +
2D Compatibility (PS) -28177 + (NN) -9437 + (LL) 7828
1D Compatibility (HY) -12800 + (ID) 2450
Total energy: -155089.0 ( -76.55 by residue)
QMean score : 0.278
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