Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTITWTAALLGSMALAGCSGPKTLYQWEGYQAQVHEYFKGESKEAQAQALEADLEKIRAK-------------NGAVPPGYHAQLGLLYSSIGKDDQMVREFETEKALFPESATYMDFLLNNARGGAR
3KAE Chain:A ((78-153))
--------------------------------------------YKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGK-SFLFSPVENLLLENKVPQK
General information:
TITO was launched using:
RESULT:
Template:
3KAE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -261 for 416 contacts (-0.6/contact) +
2D Compatibility (PS) -6821 + (NN) -3062 + (LL) 3148
1D Compatibility (HY) -800 + (ID) 450
Total energy: -8246.0 ( -19.82 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_3KAE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KAE-query.scw
PDB file :
Tito_Scwrl_3KAE.pdb
: