Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADIDALIAGAARDGRALDRMLLGAVVENNDKKRFALSADGQRIRAVQGHSHAAVAIAYAPAVPPAVLYHGTASRFLDSIRERGLVPGSRHHVHLSARRATALEVGRRYGSPVLLEIDARDMHLAGHLFHQAENGVWLTERVPVRFIREA |
5C3L Chain:B ((18-141)) | --QLLCQDVENFQKFVKEQKQVQEEISRMSS---------KAMLKVQEDIKALKQLLSVASSGLQRNALAIDKLKIETAEELKNAEIALRTQKT-PPGLQHENT---------------------APADYFHTLVQQFEVQLQQYRQQIEELENHLA------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3418 for 513 contacts (6.7/contact) +
2D Compatibility (PS) -13441 + (NN) -5894 + (LL) 4340
1D Compatibility (HY) 400 + (ID) 950
Total energy: -12127.0 ( -23.64 by residue)
QMean score : -0.130
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