Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLSIYQASIPTFLRTLGNLSAILKKAAAHAEAKNIDPRIFIDARLAPDMFPLARQVQIASDAAKGAGARLAGLEVPSYA-DTETTFDELQARIARTVEFLEGIREEQLDGAEERNVTLKVRGQEISFNGRDFLFGFALPNFFFHVTTAYAILRHNGVELGKMDFLGGA
2QE9 Chain:A ((13-168))
-----ENLYFQGMMKFFEYNWQVRDQWFTWCH--QLTTEE-LLKNRLGGVENILYTLFHIIDVEYSWIRAIQGKEDIAVQFADYQTLNKVKSLSNTFRTEIIDVLQTH------ELVSVPWET-GVLYTRDEILH-HIIAHEIHHIGQLSVWARELKLSPVSASFIGRT
General information:
TITO was launched using:
RESULT:
Template:
2QE9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53433 for 998 contacts (-53.5/contact) +
2D Compatibility (PS) -15815 + (NN) -3979 + (LL) 1100
1D Compatibility (HY) -4000 + (ID) 450
Total energy: -76577.0 ( -76.73 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_2QE9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QE9-query.scw
PDB file :
Tito_Scwrl_2QE9.pdb
: