Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNDLTLHYLYDPLCGWCYGASPLLAAACEVTGLDVRLHGGGMMTDAN---RQ-PV---GAGLRHYVMPHDLRIAQLTGQPFGKDYFDGLLRDTSAVFDSAPPTAAVLAAEALDGLGAAMLARIQRAHYVEGRRIAERPVLLEL-GAELGLG-EGFAEAFDACSGEPLRAHFADSRRLMNRLGAAGFPTFALERDGRLQVLDTGRYLGQPDDWRAFLETQLRLAGGSGAVGGAAAPLCRIDGCA |
2IMF Chain:A ((1-198)) | ---MIVDFYFDFLSPFSYLANQRLSKLAQDYGLTIRYNAIDLARVKIAIGNVGPSNRDLKVKLDYLKVDLQRWAQLYGIPLVFPA----------NYNSRRMNIGFYYSGAEA-QAAAYVNVVFNAVWGEGIAP-DLESLPALVSEKLGWDRSAFEHFLS---SNAATERYDEQTHAAIERKVFGVPTMFLGDE----MWW---GNDRLFMLESAMGRLCRQNADLSS--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -109568 for 1429 contacts (-76.7/contact) +
2D Compatibility (PS) -20132 + (NN) -3491 + (LL) 900
1D Compatibility (HY) -5600 + (ID) 1650
Total energy: -139541.0 ( -97.65 by residue)
QMean score : 0.271
|
|
|