Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALSIVASGMVSAVGLSAPASCAAIRCALDNFQETRF-IDQG--GEWLLAASVPL---E---------QPWRGRAKLLKMAARAIDEALRGQPDLD----CTELPLLLCVAEGDRPG-------------RCAGLDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLI-QGGCRQVLVAGVDSFVSGPTLAAYEARERLLT-------SQNSNGFIPGEGAAAVLVAAPLH-EEAPQLLCIGLGFGVEKATVESEDLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLK-PKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGDG------------------------------PNVFCHLGNDAGERAAALLSYRRVRAA |
| 3HHD Chain:A ((3-410)) | -GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR--GPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVVAVLLTKKSLAR-RVYATILNAGTNTDGFKEQGV-TFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPNTQPPP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188626 for 3109 contacts (-60.7/contact) +
2D Compatibility (PS) -35229 + (NN) -4272 + (LL) 412
1D Compatibility (HY) -800 + (ID) 2650
Total energy: -231165.0 ( -74.35 by residue)
QMean score : 0.438
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