Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATVIDRHSQPTWRDFLE----LTKPKVVVLMLITSLIGMLLATKAPLDGFVPWQVLIFGNLGIGLCAGAAAAVNHVVDRRIDSIMARTHKRPLAEGRVSPSMALGFALLLALAGMAVLLAFTNPLTAWLTLASLLGYAALYTGFLKRATPQNIVIGGLAGAAPPLLGWVAITGHLSAEPLLLVLIIF---AWTPPH-----FWALCIHRKDEYAK--ADIPMLPVTHGERYTKLHILLYTLVLFAVSLMPFVIHMSGLVYLLCALALGARFLDWAWALYCDSRPHAAIKTFKYSIVYLFLLFMALLVDHYLPLKLLL--- |
| 4D10 Chain:E ((24-333)) | SIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVD-----GETMIIMDSFALPVEGTETRVN-----------AQAAAYEYMAAYIENAKQVGRLENAIGWYH--SHPGYGCWLSGIDVSTQMLNQQFQ-----EPFVAVVIDPTRTISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSEDKLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245903 for 2027 contacts (-121.3/contact) +
2D Compatibility (PS) -30230 + (NN) -8532 + (LL) 1248
1D Compatibility (HY) 2000 + (ID) 1800
Total energy: -283217.0 ( -139.72 by residue)
QMean score : 0.175
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