Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVNKTVLVLVALVALVLGLTVHKVLTAQRQADPTVLLDAGIVILPQTRKVPALEFTNQDGQAVSTASLKGRWHLLFFGYTFCPDVCPTTLAQLRELQGKLPQEVRDDLQVVFVSVDPNRDTPQQIKQYLGYFNAG---FQGLTGT-PENIQKLANAMSIPYIPADTSKPNYTVDHSGNLVIIGPDGEQHGFIRAP-LNNAKLEAQLPGVLKPQA
3ME7 Chain:A ((6-161))
-------------------------------------------------YVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTP-GKDFWVITFTFDPK-DTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMT-----AGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGEGH
General information:
TITO was launched using:
RESULT:
Template:
3ME7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78312 for 1171 contacts (-66.9/contact) +
2D Compatibility (PS) -16888 + (NN) -13502 + (LL) 5652
1D Compatibility (HY) -10000 + (ID) 1550
Total energy: -114600.0 ( -97.87 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3ME7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ME7-query.scw
PDB file :
Tito_Scwrl_3ME7.pdb
: